T1DBase | Tool name | T1DBase |
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| URL | http://T1DBase.org |
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| Important features | A database focused on the genetics and genomics of type 1 diabetes susceptibility (T1D), and provides integrated set of data-sets and tools related to T1D. Currently it includes annotated genomic sequences for suspected T1D susceptibility regions; genetic data; microarray data; functional annotation of genes active in beta cells. It also provides ortholog information, tools for analyzing the data and links to pathways and interactions. |
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| Citations | Smink LJ, Helton EM, Healy BC, Cavnor CC, Lam AC, Flamez D, Burren OS, Wang Y, Dolman GE, Burdick DB, Everett VH, Glusman G, Laneri D, Rowen L, Schuilenburg H, Walker NM, Mychaleckyj J, Wicker LS, Eizirik DL, Todd JA, Goodman N. T1DBase, a community web-based resource for type 1 diabetes research. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D544-9. PubMed PMID: 15608258; PubMed Central PMCID: PMC540049. |
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| Year of publication | 2005 |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | Microarray, Human, Mouse, Rat, Multiple species |
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| Category | Online, Free |
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| Working status | Functional |
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| Other features | |
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| Other citations | 1. Hulbert EM, Smink LJ, Adlem EC, Allen JE, Burdick DB, Burren OS, Cassen VM, Cavnor CC, Dolman GE, Flamez D, Friery KF, Healy BC, Killcoyne SA, Kutlu B, Schuilenburg H, Walker NM, Mychaleckyj J, Eizirik DL, Wicker LS, Todd JA, Goodman N. T1DBase: integration and presentation of complex data for type 1 diabetes research. Nucleic Acids Res. 2007 Jan;35(Database issue):D742-6. Epub 2006 Dec 14. Erratum in: Nucleic Acids Res. 2007;35(18):6338. Cassen, Victor M [added]. PubMed PMID: 17169983; PubMed Central PMCID: PMC1781218. 2. Burren OS, Adlem EC, Achuthan P, Christensen M, Coulson RM, Todd JA. T1DBase: update 2011, organization and presentation of large-scale data sets for type 1 diabetes research. Nucleic Acids Res. 2011 Jan;39(Database issue):D997-1001. Epub 2010 Oct 11. PubMed PMID: 20937630; PubMed Central PMCID: PMC3013780. |
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